Journal Articles

45 publications in 2024

Thalamo-insular cortex connections in the rat and human (opens in a new tab)Mazhar Özkan, Damlasu Altınöz, Elif Erkan, Yasin Celal Güneş, Oktay Algın, Safiye ÇavdarNeuroscience Letters, 2024Task-modulated neural responses in scene-selective regions of the human brain (opens in a new tab)Aysu Nur Koc, Burcu Aysen Urgen, Yasemin AfacanVision Research, 2024Evaluation of the Glymphatic System in Rabbits Using Gadobutrol‐Enhanced MR Cisternography With T1 and T2 Mapping (opens in a new tab)Oktay Algın, Kadir Çetinkaya, Çağdaş Oto, Gıyas AyberkNMR in Biomedicine, 2024Exploratory Data Analysis Methods for Functional Magnetic Resonance Imaging (fMRI): A Comprehensive Review of Software Programs Used in Research (opens in a new tab)Hussain A. Jaber, Basma A. Al-Ghali, Muna M. Kareem, İlyas Çankaya, Oktay AlgınAl-Nahrain Journal for Engineering Sciences, 2024Boosting viscosity sensitivity of magnetic particle imaging using selection field gradients (opens in a new tab)A. Topcu, Asli Alpman, M. Utkur, Emine Ülkü SarıtaşApplied Physics Letters, 2024DreaMR: Diffusion-Driven Counterfactual Explanation for Functional MRI (opens in a new tab)Hasan A. Bedel, Tolga ÇukurIEEE Transactions on Medical Imaging, 2024The Use of Macrocyclic Contrast Agents and Woven EndoBridge-Assisted Embolization for Direct Carotid-Cavernous Fistulas due to Aneurysm Rupture (opens in a new tab)Oktay AlgınNeurointervention, 2024Charting brain GABA and glutamate levels across psychiatric disorders by quantitative analysis of 121 1H-MRS studies (opens in a new tab)Jiayuan Zhang, Timothea Toulopoulou, Qian Li, Lijing Niu, Lanxin Peng, Haowei Dai, Keyin Chen, Xingqin Wang, Ruiwang Huang, Xinhua Wei, et al.Psychological Medicine, 2024Associations of psychotic symptom dimensions with clinical and developmental variables in twin and general clinical samples (opens in a new tab)Alastair G. Cardno, Judith Allardyce, S C Bakker, Timothea Toulopoulou, Eugenia Kravariti, Marco Picchioni, Fergus Kane, Frühling Vesta Rijsdijk, Tariq Mahmood, Soumaya Nasser el din, et al.The British Journal of Psychiatry, 2024HydraViT: Adaptive multi-branch transformer for multi-label disease classification from Chest X-ray images (opens in a new tab)Şaban Öztürk, Mehmet Y. Turali, Tolga ÇukurBiomedical Signal Processing and Control, 2024Attentional load leads to distinct changes in early and late cortical processing of target visibility under visual masking (opens in a new tab)Esra Nur Çatak, Haluk Öğmen, Hulusi KafalıgönülConsciousness and Cognition, 2024Analyzing language ability in first-episode psychosis and their unaffected siblings: A diffusion tensor imaging tract-based spatial statistics analysis study (opens in a new tab)Tuğçe Çabuk, Didenur Şahin-Çevik, Işık Batuhan Çakmak, Helin Yılmaz Kafalı, Bedirhan Şenol, Hanife Avcı, Kader Karlı Oğuz, Timothea ToulopoulouJournal of Psychiatric Research, 2024Perception of material properties from dynamic line drawings (opens in a new tab)Amna Malik, Ying Yu, Hüseyin Boyacı, Katja DoerschnerJournal of Vision, 2024Neural correlates of dynamic lightness induction (opens in a new tab)Amna Malik, Hüseyin BoyacıJournal of Vision, 2024Photon-counting computed tomography in radiology (opens in a new tab)Oktay Algın, Nazime Tokgöz, Filippo CademartiriPolish Journal of Radiology, 2024The phase coherence of cortical oscillations predicts dynamic changes in perceived visibility (opens in a new tab)İrem Akdoğan, Haluk Öğmen, Hulusi KafalıgönülCerebral Cortex, 2024Sememe-Based Semantic Communications (opens in a new tab)Tuna Ozates, Uras Kargı, Aykut KoçIEEE Communications Letters, 2024Stroke studies in large animals: Prospects of mitochondrial transplantation and enhancing efficiency using hydrogels and nanoparticle-assisted delivery (opens in a new tab)Öner Ülger, İsmail Eş, Christopher M. Proctor, Oktay AlgınAgeing Research Reviews, 2024Attentional demands in the visual field modulate audiovisual interactions in the temporal domain (opens in a new tab)Seyma Koc Yilmaz, Hulusi KafalıgönülHuman Brain Mapping, 2024Decoding pulsatile patterns of cerebrospinal fluid dynamics through enhancing interpretability in machine learning (opens in a new tab)Ayşe Keleş, Pınar Özışık, Oktay Algın, Fatih V. Çelebi, Malika BendechacheScientific Reports, 2024Biodegradation by Cancer Cells of Magnetite Nanoflowers with and without Encapsulation in PS-b-PAA Block Copolymer Micelles (opens in a new tab)Emilia Benassai, Niéli Daffé, Elif Aygün, Audrey Geeverding, Emine Ülkü Sarıtaş, Claire Wilhelm, Ali Abou‐HassanACS Applied Materials & Interfaces, 2024Two distinct networks for encoding goals and forms of action: An effective connectivity study (opens in a new tab)Giuseppe Di Cesare, Giada Lombardi, Peter Zeidman, Burcu Aysen Urgen, Alessandra Sciutti, Karl John Friston, Giacomo RizzolattiProceedings of the National Academy of Sciences, 2024A Plug-In Graph Neural Network to Boost Temporal Sensitivity in fMRI Analysis (opens in a new tab)Irmak Sivgin, Hasan A. Bedel, Şaban Öztürk, Tolga ÇukurIEEE Journal of Biomedical and Health Informatics, 2024The visual cortex in the blind but not the auditory cortex in the deaf becomes multiple-demand regions (opens in a new tab)Hasan Duymuş, Mohini Verma, Yasemin Güçlütürk, Mesut Öztürk, Ayşe Betül Varol, Şehmus Kurt, Tamer Gezici, Berhan Faruk Akgür, İrem Giray, Elif Emir Öksüz, et al.Brain, 2024The Interplay of Prior Information and Motion Cues in Resolving Visual Ambiguity in Agent Perception (opens in a new tab)Sena Er, Hüseyin O. Elmas, Ayşe Pınar Saygın, Burcu Aysen UrgenNeuropsychologia, 2024Algısal Karar Verme Süreçleri Çerçevesinde İnsan Hareketlerini Tanıma (opens in a new tab)Burcu Aysen Urgen, Şeyda EvsenAyna Klinik Psikoloji Dergisi, 2024391. Schizophrenia Genetic Resilience Score Moderates Environmental Risk on Working Memory Connectivity (opens in a new tab)Didenur Sahin, Hao Yang Tan, Shizhong Han, Daniel R. Weinberger, Timothea ToulopoulouBiological Psychiatry, 2024pH-Sensitive, Encapsulated, and Natural Oral Contrast Media for Enterography (opens in a new tab)Oktay Algın, Muharrem Olcer, Çağdaş OtoCurrent Research in MRI, 2024Minimizing electric fields and increasing peripheral nerve stimulation thresholds using a body gradient array coil (opens in a new tab)Reza Babaloo, Ergin AtalarMagnetic Resonance in Medicine, 2024Biological motion perception in the theoretical framework of perceptual decision-making: An event-related potential study (opens in a new tab)Osman Çağrı Oğuz, Berfin Aydın, Burcu Aysen UrgenVision Research, 2024Proof-of-Concept Simulation Study: An Open-sided Hybrid MPI and Low-Field MRI Scanner (opens in a new tab)Sefa Karaca, Damla Alptekin Soydan, Can Barış Top, Emine Ülkü SarıtaşInternational journal on magnetic particle imaging, 2024Minimizing Induced Electric Fields in Human Head-Size MPI Systems (opens in a new tab)Ali Alper Özaslan, Reza Babaloo, Ergin Atalar, Emine Ülkü SarıtaşInternational journal on magnetic particle imaging, 2024Natural language processing for defining linguistic features in schizophrenia: A sample from Turkish speakers (opens in a new tab)Tuğçe Çabuk, Nurullah Sevim, Emre Mutlu, Ayşe Elif Anil Yağcioğlu, Aykut Koç, Timothea ToulopoulouSchizophrenia Research, 2024One model to unite them all: Personalized federated learning of multi-contrast MRI synthesis (opens in a new tab)Onat Dalmaz, Muhammad Usama Mirza, Gokberk Elmas, Muzaffer Özbey, Salman Ul Hassan Dar, Emir Ceyani, Kader Karlı Oğuz, Salman Avestimehr, Tolga ÇukurMedical Image Analysis, 2024Causal Discovery Analysis Reveals Insights into Psychosis Proneness, Brain Function, and Environmental Factors among Young Individuals (opens in a new tab)Tuba Sahin-Ilikoglu, Sisi Ma, Erich Kummerfeld, Eric Rawls, Hao Yang Tan, Timothea ToulopoulouPsychiatry Research Neuroimaging, 2024Intrasaccular Flow Disruptor (Woven EndoBridge) Assisted Embolization of Vertebral Arteriovenous Fistulas (opens in a new tab)Oktay AlgınNeurointervention, 2024Comparison of Angiographic Outcomes of Woven EndoBridge and Balloon‐Assisted Coiling for the Treatment of Ruptured Wide‐Necked Aneurysms: A Multicentric Study (opens in a new tab)Aarón Rodríguez-Calienes, Juan Vivanco‐Suarez, Milagros Galecio‐Castillo, Mahmoud Dibas, Bradley A. Gross, Mudassir Farooqui, Oktay Algın, Türker Kılıç, Yasin Celal Güneş, Chaim M. Feigen, et al.Stroke Vascular and Interventional Neurology, 2024Woven EndoBridge versus stent-assisted coil embolization for the treatment of ruptured wide-necked aneurysms: A multicentric experience (opens in a new tab)Aarón Rodríguez-Calienes, Juan Vivanco‐Suarez, Yujing Lu, Milagros Galecio‐Castillo, Bradley A. Gross, Mudassir Farooqui, Oktay Algın, Chaim M. Feigen, David Altschul, Santiago Ortega‐GutiérrezInterventional Neuroradiology, 2024Trainable Fractional Fourier Transform (opens in a new tab)Emirhan Koç, Tuna Alikaşifoğlu, Arda Can Aras, Aykut KoçIEEE Signal Processing Letters, 2024Graph Receptive Transformer Encoder for Text Classification (opens in a new tab)Arda Can Aras, Tuna Alikaşifoğlu, Aykut KoçIEEE Transactions on Signal and Information Processing over Networks, 2024Wiener Filtering in Joint Time-Vertex Fractional Fourier Domains (opens in a new tab)Tuna Alikaşifoğlu, Bünyamin Kartal, Aykut KoçIEEE Signal Processing Letters, 2024Text-RGNNs: Relational Modeling for Heterogeneous Text Graphs (opens in a new tab)Arda Can Aras, Tuna Alikaşifoğlu, Aykut KoçIEEE Signal Processing Letters, 2024Graph Fractional Fourier Transform: A Unified Theory (opens in a new tab)Tuna Alikaşifoğlu, Bünyamin Kartal, Aykut KoçIEEE Transactions on Signal Processing, 2024CalibFPA: A Focal Plane Array Imaging System Based on Online Deep-Learning Calibration (opens in a new tab)Alper Güngör, M. Umut Bahçeci, Yasin Ergen, Ahmet Sözak, O. Oner Ekiz, Tolga Yelboğa, Tolga ÇukurIEEE Transactions on Computational Imaging, 2024Evaluation of relationship between cognitive functions, autoantibodies and neuroimaging findings in patients with neuropsychiatric systemic lupus erythematosus: a cross-sectional study (opens in a new tab)Tahsin Rollas, Elçin Özçelik Eroğlu, Mevhibe İrem Yıldız, M. Karataş, Levent Kılıç, Umut Kalyoncu, Burçin Şener, E. Bulut, Kader Karlı Oğuz, Aygün ErtuğrulNeuroscience Applied, 2024